Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMGA2P52926 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.2□□□□□ -0.3
HMGA2P52926 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMGA2P52926 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HMGA2P52926 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGA2P52926 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGA2P52926 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 DLX4-206ENST00000611342 1662 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 AC007952.5-201ENST00000572818 1486 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HMGA2P52926 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGA2P52926 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HMGA2P52926 FAM8A4P-201ENST00000435433 1213 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.19□□□□□ -0.3
HMGA2P52926 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.19□□□□□ -0.3
HMGA2P52926 RNA5SP486-201ENST00000515961 83 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HMGA2P52926 MIR4683-201ENST00000579659 81 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 GNRHR2-203ENST00000581100 1187 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 AC008494.3-201ENST00000606615 944 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 AL358472.3-201ENST00000608147 415 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.19□□□□□ -0.3
HMGA2P52926 AC106028.4-201ENST00000614509 607 ntBASIC13.19□□□□□ -0.3
HMGA2P52926 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
HMGA2P52926 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMGA2P52926 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.19□□□□□ -0.3
HMGA2P52926 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 TMBIM7P-202ENST00000641474 1516 ntBASIC13.18□□□□□ -0.3
HMGA2P52926 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.18□□□□□ -0.3
HMGA2P52926 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 LAP3P2-201ENST00000454686 1454 ntBASIC13.18□□□□□ -0.3
HMGA2P52926 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
HMGA2P52926 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
HMGA2P52926 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.18□□□□□ -0.3
HMGA2P52926 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.18□□□□□ -0.3
HMGA2P52926 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.18□□□□□ -0.3
HMGA2P52926 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 AL512310.5-201ENST00000551999 515 ntBASIC13.18□□□□□ -0.3
HMGA2P52926 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.18□□□□□ -0.3
HMGA2P52926 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.18□□□□□ -0.3
HMGA2P52926 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 OR10B1P-201ENST00000601666 907 ntBASIC13.18□□□□□ -0.3
HMGA2P52926 AC004233.3-201ENST00000607794 1269 ntBASIC13.18□□□□□ -0.3
HMGA2P52926 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HMGA2P52926 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms