Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFC5P40937 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFC5P40937 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFC5P40937 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RFC5P40937 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 FAM90A2P-201ENST00000511144 1395 ntBASIC15.93■□□□□ 0.14
RFC5P40937 FAM90A25P-201ENST00000528404 1395 ntBASIC15.93■□□□□ 0.14
RFC5P40937 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 BANF1P3-201ENST00000412556 261 ntBASIC15.93■□□□□ 0.14
RFC5P40937 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.93■□□□□ 0.14
RFC5P40937 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.93■□□□□ 0.14
RFC5P40937 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC5P40937 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.93■□□□□ 0.14
RFC5P40937 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC5P40937 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC5P40937 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
RFC5P40937 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFC5P40937 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RFC5P40937 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.93■□□□□ 0.14
RFC5P40937 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFC5P40937 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 CCT8L1P-201ENST00000465400 1674 ntBASIC15.92■□□□□ 0.14
RFC5P40937 OR2I1P-209ENST00000641730 5365 ntBASIC15.92■□□□□ 0.14
RFC5P40937 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC5P40937 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC5P40937 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.92■□□□□ 0.14
RFC5P40937 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 AC234782.1-201ENST00000451950 919 ntBASIC15.92■□□□□ 0.14
RFC5P40937 KRT8P1-201ENST00000557533 1207 ntBASIC15.92■□□□□ 0.14
RFC5P40937 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 ADAM3B-201ENST00000569937 840 ntBASIC15.92■□□□□ 0.14
RFC5P40937 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC5P40937 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 LINC00552-201ENST00000625151 2579 ntBASIC15.92■□□□□ 0.14
RFC5P40937 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 TBC1D3J-201ENST00000620719 1426 ntBASIC15.92■□□□□ 0.14
RFC5P40937 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC5P40937 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
RFC5P40937 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC5P40937 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC5P40937 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC5P40937 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms