Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 TTTY23B-201ENST00000442790 549 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 GCOM2-201ENST00000509133 1104 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC025279.2-201ENST00000569730 653 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 GNRHR2-203ENST00000581100 1187 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 MIR3197-201ENST00000582241 73 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC008735.3-201ENST00000596646 500 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC015688.4-201ENST00000580780 1647 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 HSPA8P5-201ENST00000456928 2069 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 AC092053.3-201ENST00000641308 4975 ntBASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RHBDD3Q9Y3P4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AC092933.1-201ENST00000393644 945 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 TMEM14DP-201ENST00000422205 345 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 USP32P1-208ENST00000506594 1164 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AL391280.1-201ENST00000506969 1062 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 MEX3B-202ENST00000558133 4333 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ECM1P1-201ENST00000604092 1279 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms