Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 AC117489.1-201ENST00000625169 3217 ntBASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PARPBPQ9NWS1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 GOLGA2P4-201ENST00000441462 777 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC022447.6-201ENST00000515522 438 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC104982.3-201ENST00000581995 514 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 RN7SL219P-201ENST00000582872 296 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC132192.2-201ENST00000596206 1147 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AL033527.4-201ENST00000641026 673 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AL590440.2-201ENST00000641973 1595 ntBASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PARPBPQ9NWS1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 KHSRPP1-201ENST00000427983 1768 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 MYADML-201ENST00000474610 2147 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms