Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AC006529.1-201ENST00000459978 637 ntBASIC14.74□□□□□ -0.05
PHOX2BQ99453 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AC007952.4-201ENST00000573866 637 ntBASIC14.74□□□□□ -0.05
PHOX2BQ99453 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 AP000322.3-201ENST00000608665 388 ntBASIC14.74□□□□□ -0.05
PHOX2BQ99453 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 KRT8P31-201ENST00000504812 1408 ntBASIC14.74□□□□□ -0.05
PHOX2BQ99453 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PHOX2BQ99453 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PHOX2BQ99453 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 MIR648-201ENST00000385046 94 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC108734.2-201ENST00000420887 1069 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 AL929302.1-201ENST00000426556 871 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 KRT18P46-201ENST00000435568 1279 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 HERC2P11-201ENST00000562845 725 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC100756.2-201ENST00000569537 736 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC14.73□□□□□ -0.05
PHOX2BQ99453 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PHOX2BQ99453 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.73□□□□□ -0.05
PHOX2BQ99453 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms