Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS33AQ96AX1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 CLUHP2-201ENST00000426660 1303 ntBASIC14□□□□□ -0.17
VPS33AQ96AX1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 CALY-202ENST00000368555 783 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14□□□□□ -0.17
VPS33AQ96AX1 KRT18P25-201ENST00000508931 1278 ntBASIC14□□□□□ -0.17
VPS33AQ96AX1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 CLUHP6-201ENST00000580789 941 ntBASIC14□□□□□ -0.17
VPS33AQ96AX1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 PCDHA5-203ENST00000614258 4248 ntBASIC14□□□□□ -0.17
VPS33AQ96AX1 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
VPS33AQ96AX1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VPS33AQ96AX1 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS33AQ96AX1 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 TUBB8P4-201ENST00000511806 1324 ntBASIC13.99□□□□□ -0.17
VPS33AQ96AX1 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 ACKR1-201ENST00000368121 1240 ntBASIC13.99□□□□□ -0.17
VPS33AQ96AX1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.99□□□□□ -0.17
VPS33AQ96AX1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 UGT1A2P-201ENST00000454886 866 ntBASIC13.99□□□□□ -0.17
VPS33AQ96AX1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS33AQ96AX1 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms