Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 ACTG1P14-201ENST00000446382 1122 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC025048.3-201ENST00000590609 569 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC009955.4-201ENST00000597192 544 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC140113.2-201ENST00000604370 208 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC005702.4-201ENST00000618393 416 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 LINC00628-201ENST00000628516 1289 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 AC073862.5-201ENST00000624129 2027 ntBASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LYSMD2Q8IV50 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 ZNF259P1-201ENST00000407656 1365 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AL035456.1-201ENST00000456064 1369 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 IL9RP2-201ENST00000423948 1312 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AC023274.1-201ENST00000418278 595 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 FAM58DP-201ENST00000428076 619 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AL079307.3-201ENST00000556114 283 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AC007967.4-201ENST00000614700 386 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 BAP1-211ENST00000615113 489 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AC145098.2-201ENST00000623593 3026 ntBASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms