Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 MIR326-201ENST00000362220 95 ntBASIC13.43□□□□□ -0.26
VRK2Q86Y07 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AC112492.5-201ENST00000421897 457 ntBASIC13.43□□□□□ -0.26
VRK2Q86Y07 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 KRT17P7-201ENST00000451704 1104 ntBASIC13.43□□□□□ -0.26
VRK2Q86Y07 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AC104506.1-201ENST00000609247 429 ntBASIC13.43□□□□□ -0.26
VRK2Q86Y07 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 RHOXF1P1-202ENST00000635473 501 ntBASIC13.43□□□□□ -0.26
VRK2Q86Y07 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.43□□□□□ -0.26
VRK2Q86Y07 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
VRK2Q86Y07 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AC126335.2-201ENST00000623362 4637 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 E2F3P2-201ENST00000447755 1422 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 FAM90A12P-201ENST00000519497 2375 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 FAM90A24P-201ENST00000520792 2369 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AC010141.1-201ENST00000411585 623 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 CNN2P10-201ENST00000443067 918 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 AL355994.2-201ENST00000447882 704 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 HIST2H2BB-201ENST00000449108 381 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AP006547.1-201ENST00000563435 692 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 PDIA3P1-201ENST00000471856 1510 ntBASIC13.42□□□□□ -0.26
VRK2Q86Y07 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK2Q86Y07 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK2Q86Y07 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms