Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC003686.1-201ENST00000550956 1034 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC005586.2-201ENST00000563946 837 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC026740.1-201ENST00000607068 791 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 AC099063.4-201ENST00000641099 1602 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 LINC00552-201ENST00000625151 2579 ntBASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF44Q7L0R7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AL161932.2-201ENST00000435436 679 ntBASIC13.91□□□□□ -0.18
RNF44Q7L0R7 XBP1P1-201ENST00000436573 652 ntBASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AC011742.3-201ENST00000439053 820 ntBASIC13.91□□□□□ -0.18
RNF44Q7L0R7 ST13P19-201ENST00000442505 1124 ntBASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AC125604.1-201ENST00000496255 707 ntBASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms