Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm43615-201ENSMUST00000197465 1773 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm18806-201ENSMUST00000207607 1775 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm42693-201ENSMUST00000196779 631 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm21817-201ENSMUST00000178584 2583 ntBASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trav3-3Q5R1C3 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm15172-201ENSMUST00000118945 1046 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm8018-201ENSMUST00000173536 789 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm38092-201ENSMUST00000195600 653 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 AC167013.1-201ENSMUST00000228592 202 ntBASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav3-3Q5R1C3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms