Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLUP10909 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.15□□□□□ -0.3
CLUP10909 POM121L8P-201ENST00000417732 1281 ntBASIC13.15□□□□□ -0.3
CLUP10909 POM121L9P-203ENST00000441984 1285 ntBASIC13.15□□□□□ -0.3
CLUP10909 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 AC022137.2-201ENST00000503482 481 ntBASIC13.15□□□□□ -0.3
CLUP10909 AL391280.1-201ENST00000506969 1062 ntBASIC13.15□□□□□ -0.3
CLUP10909 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 RNA5SP421-201ENST00000516864 134 ntBASIC13.15□□□□□ -0.3
CLUP10909 API5-211ENST00000534695 560 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 ENPP7P5-201ENST00000541031 1031 ntBASIC13.15□□□□□ -0.3
CLUP10909 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.15□□□□□ -0.3
CLUP10909 WASH4P-201ENST00000564273 1246 ntBASIC13.15□□□□□ -0.3
CLUP10909 AC004233.3-201ENST00000607794 1269 ntBASIC13.15□□□□□ -0.3
CLUP10909 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 AL391825.1-201ENST00000457671 1364 ntBASIC13.15□□□□□ -0.3
CLUP10909 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 PPT1-213ENST00000641319 2388 ntBASIC13.15□□□□□ -0.3
CLUP10909 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLUP10909 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 LINC02486-201ENST00000604157 3000 ntBASIC13.15□□□□□ -0.3
CLUP10909 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLUP10909 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CLUP10909 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 MIR661-201ENST00000384842 89 ntBASIC13.14□□□□□ -0.31
CLUP10909 AC245100.3-201ENST00000441281 285 ntBASIC13.14□□□□□ -0.31
CLUP10909 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 MESTP3-201ENST00000503460 968 ntBASIC13.14□□□□□ -0.31
CLUP10909 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 SORD2P-201ENST00000558556 1069 ntBASIC13.14□□□□□ -0.31
CLUP10909 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.14□□□□□ -0.31
CLUP10909 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 AC145423.3-201ENST00000615987 467 ntBASIC13.14□□□□□ -0.31
CLUP10909 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CLUP10909 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLUP10909 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CLUP10909 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLUP10909 FKBP4P6-201ENST00000457486 1332 ntBASIC13.13□□□□□ -0.31
CLUP10909 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.13□□□□□ -0.31
CLUP10909 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLUP10909 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLUP10909 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLUP10909 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms