Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC073548.1-201ENST00000624088 1882 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 HSPA8P5-201ENST00000456928 2069 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.29□□□□□ -0.12
NPAS2Q99743 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 KRT43P-201ENST00000434019 910 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
NPAS2Q99743 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.29□□□□□ -0.12
NPAS2Q99743 RPS2P32-201ENST00000439199 892 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.29□□□□□ -0.12
NPAS2Q99743 AC022137.2-201ENST00000503482 481 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.29□□□□□ -0.12
NPAS2Q99743 AC009486.1-201ENST00000569860 813 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NPAS2Q99743 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NPAS2Q99743 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.29□□□□□ -0.12
NPAS2Q99743 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
NPAS2Q99743 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 AC131212.3-201ENST00000624087 4219 ntBASIC14.29□□□□□ -0.12
NPAS2Q99743 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NPAS2Q99743 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPAS2Q99743 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NPAS2Q99743 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.28□□□□□ -0.12
NPAS2Q99743 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NPAS2Q99743 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 BOLA2P3-201ENST00000404566 256 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.28□□□□□ -0.12
NPAS2Q99743 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 AL138799.1-201ENST00000448213 1675 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 KRT223P-202ENST00000449164 1292 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 FTH1P14-201ENST00000482930 551 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 AC104989.1-201ENST00000519711 778 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 AC011840.2-201ENST00000563063 1520 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 GNRHR2-203ENST00000581100 1187 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.28□□□□□ -0.12
NPAS2Q99743 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.28□□□□□ -0.12
NPAS2Q99743 AC020658.7-201ENST00000624274 2442 ntBASIC14.28□□□□□ -0.12
NPAS2Q99743 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms