Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 AC232323.1-201ENST00000540724 2099 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 AC239868.1-201ENST00000369385 493 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.56□□□□□ -0.24
EFNA3P52797 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 MIR4754-201ENST00000582477 89 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 CU633904.3-201ENST00000624042 1029 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 AC015967.2-201ENST00000624092 234 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 AC006435.4-201ENST00000625037 234 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 AL356737.1-201ENST00000634391 234 ntBASIC13.56□□□□□ -0.24
EFNA3P52797 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 RN7SL832P-201ENST00000607781 1756 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.55□□□□□ -0.24
EFNA3P52797 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.55□□□□□ -0.24
EFNA3P52797 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.55□□□□□ -0.24
EFNA3P52797 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
EFNA3P52797 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 RNA5SP359-201ENST00000364838 113 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.55□□□□□ -0.24
EFNA3P52797 OR2K2-202ENST00000374428 1038 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
EFNA3P52797 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.55□□□□□ -0.24
EFNA3P52797 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.55□□□□□ -0.24
EFNA3P52797 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.55□□□□□ -0.24
EFNA3P52797 AC092580.1-201ENST00000433998 658 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.55□□□□□ -0.24
EFNA3P52797 UPF3AP2-201ENST00000457924 1132 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 RN7SL720P-201ENST00000488178 304 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 AC134698.3-201ENST00000523880 214 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
EFNA3P52797 AC090857.1-201ENST00000527400 390 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 AC242376.1-201ENST00000559033 726 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.55□□□□□ -0.24
EFNA3P52797 AL109837.1-201ENST00000603272 613 ntBASIC13.55□□□□□ -0.24
EFNA3P52797 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.55□□□□□ -0.24
EFNA3P52797 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
EFNA3P52797 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
EFNA3P52797 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNA3P52797 AC005912.2-201ENST00000619492 2400 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms