Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PTPN6P29350 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 AC006001.1-201ENST00000325130 474 ntBASIC13.79□□□□□ -0.2
PTPN6P29350 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.79□□□□□ -0.2
PTPN6P29350 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PTPN6P29350 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.79□□□□□ -0.2
PTPN6P29350 AC099336.1-201ENST00000417053 1171 ntBASIC13.79□□□□□ -0.2
PTPN6P29350 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.79□□□□□ -0.2
PTPN6P29350 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 AL590640.2-201ENST00000457038 527 ntBASIC13.79□□□□□ -0.2
PTPN6P29350 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.79□□□□□ -0.2
PTPN6P29350 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.79□□□□□ -0.2
PTPN6P29350 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.79□□□□□ -0.2
PTPN6P29350 AC079316.1-201ENST00000548397 411 ntBASIC13.79□□□□□ -0.2
PTPN6P29350 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.79□□□□□ -0.2
PTPN6P29350 AC138951.2-201ENST00000623455 1161 ntBASIC13.79□□□□□ -0.2
PTPN6P29350 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.79□□□□□ -0.2
PTPN6P29350 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PTPN6P29350 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.79□□□□□ -0.2
PTPN6P29350 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PTPN6P29350 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PTPN6P29350 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PTPN6P29350 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 HLA-V-201ENST00000429037 534 ntBASIC13.78□□□□□ -0.2
PTPN6P29350 AC026954.1-201ENST00000429771 1293 ntBASIC13.78□□□□□ -0.2
PTPN6P29350 RPS2P32-201ENST00000439199 892 ntBASIC13.78□□□□□ -0.2
PTPN6P29350 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 CSF2RBP1-201ENST00000447905 391 ntBASIC13.78□□□□□ -0.2
PTPN6P29350 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 ECM1P1-201ENST00000604092 1279 ntBASIC13.78□□□□□ -0.2
PTPN6P29350 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms