Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP3Q9UKI2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP3Q9UKI2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.83■□□□□ 0.6
CDC42EP3Q9UKI2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42EP3Q9UKI2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 ERN1-208ENST00000606895 2068 ntBASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 AC090192.1-201ENST00000517740 490 ntBASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42EP3Q9UKI2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 AC099791.1-201ENST00000416440 715 ntBASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 RARRES2P11-201ENST00000635158 484 ntBASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDC42EP3Q9UKI2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP3Q9UKI2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 AC099791.2-201ENST00000605725 427 ntBASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 AL137784.2-201ENST00000607332 1000 ntBASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP3Q9UKI2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 AC034268.1-201ENST00000441047 882 ntBASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP3Q9UKI2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC42EP3Q9UKI2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDC42EP3Q9UKI2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42EP3Q9UKI2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms