Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC42SE1Q9NRR8 AC141586.4-201ENST00000624558 1573 ntBASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 AC026310.3-201ENST00000625186 2373 ntBASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE1Q9NRR8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE1Q9NRR8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE1Q9NRR8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CDC42SE1Q9NRR8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE1Q9NRR8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE1Q9NRR8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC42SE1Q9NRR8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC42SE1Q9NRR8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms