Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb8Q91XZ2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb8Q91XZ2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb8Q91XZ2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb8Q91XZ2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb8Q91XZ2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdhb8Q91XZ2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb8Q91XZ2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb8Q91XZ2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdhb8Q91XZ2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb8Q91XZ2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb8Q91XZ2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb8Q91XZ2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb8Q91XZ2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb8Q91XZ2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb8Q91XZ2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb8Q91XZ2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Gm15546-201ENSMUST00000122095 826 ntBASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb8Q91XZ2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb8Q91XZ2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb8Q91XZ2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Pcdhb8Q91XZ2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb8Q91XZ2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb8Q91XZ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb8Q91XZ2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb8Q91XZ2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhb8Q91XZ2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb8Q91XZ2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb8Q91XZ2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms