Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf42Q8N5U0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf42Q8N5U0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C11orf42Q8N5U0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C11orf42Q8N5U0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 AL356441.2-201ENST00000443009 864 ntBASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 MTDHP2-201ENST00000601468 714 ntBASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
C11orf42Q8N5U0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 ALDH1A3-203ENST00000557963 1670 ntBASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.75■□□□□ 0.59
C11orf42Q8N5U0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 KRT16P3-201ENST00000439127 1283 ntBASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
C11orf42Q8N5U0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
C11orf42Q8N5U0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 MIR6724-1-201ENST00000616420 92 ntBASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 MIR6724-2-201ENST00000616483 92 ntBASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 MIR6724-4-201ENST00000617390 92 ntBASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 MIR6724-3-201ENST00000622482 92 ntBASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C11orf42Q8N5U0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 ABCB10P4-201ENST00000566803 2184 ntBASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms