Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 pRNA.5-201ENST00000612139 90 ntBASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 pRNA.11-201ENST00000618423 90 ntBASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 pRNA.13-201ENST00000619112 90 ntBASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC35.21■■■■□ 3.23
ABCA9Q8IUA7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
ABCA9Q8IUA7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
ABCA9Q8IUA7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
ABCA9Q8IUA7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC35.2■■■■□ 3.23
ABCA9Q8IUA7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC35.2■■■■□ 3.22
ABCA9Q8IUA7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
ABCA9Q8IUA7 AL022069.1-201ENST00000568025 1636 ntBASIC35.19■■■■□ 3.22
ABCA9Q8IUA7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC35.18■■■■□ 3.22
ABCA9Q8IUA7 KRT18P61-201ENST00000585825 1298 ntBASIC35.18■■■■□ 3.22
ABCA9Q8IUA7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
ABCA9Q8IUA7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA9Q8IUA7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC35.17■■■■□ 3.22
ABCA9Q8IUA7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA9Q8IUA7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA9Q8IUA7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC35.17■■■■□ 3.22
ABCA9Q8IUA7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA9Q8IUA7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
ABCA9Q8IUA7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC35.16■■■■□ 3.22
ABCA9Q8IUA7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC35.16■■■■□ 3.22
ABCA9Q8IUA7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC35.16■■■■□ 3.22
ABCA9Q8IUA7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC35.16■■■■□ 3.22
ABCA9Q8IUA7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC35.15■■■■□ 3.22
ABCA9Q8IUA7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA9Q8IUA7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC35.15■■■■□ 3.22
ABCA9Q8IUA7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA9Q8IUA7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC35.15■■■■□ 3.22
ABCA9Q8IUA7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA9Q8IUA7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC35.14■■■■□ 3.22
ABCA9Q8IUA7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 GXYLT1P2-201ENST00000433312 1230 ntBASIC35.13■■■■□ 3.21
ABCA9Q8IUA7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 ABHD17AP1-201ENST00000358206 933 ntBASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 NTF6G-201ENST00000591094 616 ntBASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC35.12■■■■□ 3.21
ABCA9Q8IUA7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC35.11■■■■□ 3.21
ABCA9Q8IUA7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC35.1■■■■□ 3.21
ABCA9Q8IUA7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC35.09■■■■□ 3.21
ABCA9Q8IUA7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
ABCA9Q8IUA7 AC006015.1-201ENST00000429970 570 ntBASIC35.09■■■■□ 3.21
ABCA9Q8IUA7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC35.09■■■■□ 3.21
ABCA9Q8IUA7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC35.08■■■■□ 3.21
ABCA9Q8IUA7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC35.08■■■■□ 3.21
ABCA9Q8IUA7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC35.08■■■■□ 3.21
ABCA9Q8IUA7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC35.08■■■■□ 3.21
ABCA9Q8IUA7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.21
ABCA9Q8IUA7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
ABCA9Q8IUA7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
ABCA9Q8IUA7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
ABCA9Q8IUA7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC35.07■■■■□ 3.2
ABCA9Q8IUA7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
ABCA9Q8IUA7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
ABCA9Q8IUA7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC35.06■■■■□ 3.2
ABCA9Q8IUA7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
ABCA9Q8IUA7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC35.06■■■■□ 3.2
ABCA9Q8IUA7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC35.05■■■■□ 3.2
ABCA9Q8IUA7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC35.05■■■■□ 3.2
ABCA9Q8IUA7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
ABCA9Q8IUA7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC35.05■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms