Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO4Q2I0M5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.27■■□□□ 1.16
RSPO4Q2I0M5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.27■■□□□ 1.16
RSPO4Q2I0M5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.27■■□□□ 1.16
RSPO4Q2I0M5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.27■■□□□ 1.16
RSPO4Q2I0M5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.27■■□□□ 1.16
RSPO4Q2I0M5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RSPO4Q2I0M5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO4Q2I0M5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 CROCCP5-201ENST00000436658 830 ntBASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RSPO4Q2I0M5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 NCF1B-203ENST00000435988 1254 ntBASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO4Q2I0M5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RSPO4Q2I0M5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 AC142086.6-201ENST00000621154 1765 ntBASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO4Q2I0M5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 pRNA.6-201ENST00000610482 90 ntBASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 pRNA.5-201ENST00000612139 90 ntBASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 BID-214ENST00000617586 542 ntTSL 5 BASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 pRNA.11-201ENST00000618423 90 ntBASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 pRNA.13-201ENST00000619112 90 ntBASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO4Q2I0M5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 AP004609.3-201ENST00000610705 1884 ntBASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.2■■□□□ 1.14
RSPO4Q2I0M5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RSPO4Q2I0M5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RSPO4Q2I0M5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RSPO4Q2I0M5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.19■■□□□ 1.14
RSPO4Q2I0M5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RSPO4Q2I0M5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
RSPO4Q2I0M5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO4Q2I0M5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.18■■□□□ 1.14
RSPO4Q2I0M5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.18■■□□□ 1.14
RSPO4Q2I0M5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RSPO4Q2I0M5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO4Q2I0M5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.17■■□□□ 1.14
RSPO4Q2I0M5 GPX1P1-201ENST00000388829 606 ntBASIC22.17■■□□□ 1.14
RSPO4Q2I0M5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RSPO4Q2I0M5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.17■■□□□ 1.14
RSPO4Q2I0M5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms