Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 ICY2YPL250C 411 nt3.52□□□□□ -1.85
VPS55P47111 THS1YIL078W 2205 nt3.52□□□□□ -1.85
VPS55P47111 SSH4YKL124W 1740 nt3.52□□□□□ -1.85
VPS55P47111 YOL153CYOL153C 1746 nt3.52□□□□□ -1.85
VPS55P47111 CDC15YAR019C 2925 nt3.52□□□□□ -1.85
VPS55P47111 FZO1YBR179C 2568 nt3.52□□□□□ -1.85
VPS55P47111 MBP1YDL056W 2502 nt3.51□□□□□ -1.85
VPS55P47111 CEG1YGL130W 1380 nt3.51□□□□□ -1.85
VPS55P47111 MNN1YER001W 2289 nt3.51□□□□□ -1.85
VPS55P47111 OLE1YGL055W 1533 nt3.51□□□□□ -1.85
VPS55P47111 MSC2YDR205W 2175 nt3.51□□□□□ -1.85
VPS55P47111 SSA2YLL024C 1920 nt3.51□□□□□ -1.85
VPS55P47111 YDR545C-AYDR545C-A 480 nt3.51□□□□□ -1.85
VPS55P47111 RIP1YEL024W 648 nt3.51□□□□□ -1.85
VPS55P47111 YEL077W-AYEL077W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YER190C-BYER190C-B 483 nt3.51□□□□□ -1.85
VPS55P47111 YFL068WYFL068W 483 nt3.51□□□□□ -1.85
VPS55P47111 YGR296C-BYGR296C-B 483 nt3.51□□□□□ -1.85
VPS55P47111 YHL050W-AYHL050W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YHR219C-AYHR219C-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YIL177W-AYIL177W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YJL225W-AYJL225W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YKL107WYKL107W 930 nt3.51□□□□□ -1.85
VPS55P47111 YLL066W-AYLL066W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YLL067W-AYLL067W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YLR466C-AYLR466C-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YLR467C-AYLR467C-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YML133W-BYML133W-B 483 nt3.51□□□□□ -1.85
VPS55P47111 YNL339W-BYNL339W-B 483 nt3.51□□□□□ -1.85
VPS55P47111 BUD17YNR027W 954 nt3.51□□□□□ -1.85
VPS55P47111 YBL113W-AYBL113W-A 483 nt3.51□□□□□ -1.85
VPS55P47111 YOR396C-AYOR396C-A 483 nt3.51□□□□□ -1.85
VPS55P47111 HST2YPL015C 1074 nt3.51□□□□□ -1.85
VPS55P47111 YPL283W-BYPL283W-B 483 nt3.51□□□□□ -1.85
VPS55P47111 YPR204C-AYPR204C-A 483 nt3.51□□□□□ -1.85
VPS55P47111 ATG7YHR171W 1893 nt3.51□□□□□ -1.85
VPS55P47111 DPH6YLR143W 2058 nt3.51□□□□□ -1.85
VPS55P47111 FRE1YLR214W 2061 nt3.51□□□□□ -1.85
VPS55P47111 VAC7YNL054W 3498 nt3.51□□□□□ -1.85
VPS55P47111 PHO84YML123C 1764 nt3.51□□□□□ -1.85
VPS55P47111 AKL1YBR059C 3327 nt3.5□□□□□ -1.85
VPS55P47111 SPC97YHR172W 2472 nt3.5□□□□□ -1.85
VPS55P47111 YNK1YKL067W 462 nt3.5□□□□□ -1.85
VPS55P47111 ACP1YKL192C 378 nt3.5□□□□□ -1.85
VPS55P47111 KRS1YDR037W 1776 nt3.5□□□□□ -1.85
VPS55P47111 GSY1YFR015C 2127 nt3.5□□□□□ -1.85
VPS55P47111 EUG1YDR518W 1554 nt3.5□□□□□ -1.85
VPS55P47111 AIM17YHL021C 1398 nt3.5□□□□□ -1.85
VPS55P47111 YAL047W-AYAL047W-A 330 nt3.49□□□□□ -1.85
VPS55P47111 NMD4YLR363C 657 nt3.49□□□□□ -1.85
VPS55P47111 DOM34YNL001W 1161 nt3.49□□□□□ -1.85
VPS55P47111 YNL057WYNL057W 333 nt3.49□□□□□ -1.85
VPS55P47111 RRN11YML043C 1524 nt3.49□□□□□ -1.85
VPS55P47111 YHR140WYHR140W 720 nt3.48□□□□□ -1.85
VPS55P47111 YKR073CYKR073C 321 nt3.48□□□□□ -1.85
VPS55P47111 YMR085WYMR085W 1299 nt3.48□□□□□ -1.85
VPS55P47111 GPI12YMR281W 915 nt3.48□□□□□ -1.85
VPS55P47111 TOM7YNL070W 183 nt3.48□□□□□ -1.85
VPS55P47111 YNL217WYNL217W 981 nt3.48□□□□□ -1.85
VPS55P47111 YNG1YOR064C 660 nt3.48□□□□□ -1.85
VPS55P47111 TIF5YPR041W 1218 nt3.48□□□□□ -1.85
VPS55P47111 RXT3YDL076C 885 nt3.47□□□□□ -1.85
VPS55P47111 RNA15YGL044C 891 nt3.47□□□□□ -1.85
VPS55P47111 RFC2YJR068W 1062 nt3.47□□□□□ -1.85
VPS55P47111 YAR023CYAR023C 540 nt3.47□□□□□ -1.85
VPS55P47111 IMP2YMR035W 534 nt3.47□□□□□ -1.85
VPS55P47111 RRN9YMR270C 1098 nt3.47□□□□□ -1.85
VPS55P47111 MVD1YNR043W 1191 nt3.47□□□□□ -1.85
VPS55P47111 YPL278CYPL278C 303 nt3.47□□□□□ -1.85
VPS55P47111 PRD1YCL057W 2139 nt3.47□□□□□ -1.85
VPS55P47111 YER158CYER158C 1722 nt3.47□□□□□ -1.85
VPS55P47111 SEN1YLR430W 6696 nt3.46□□□□□ -1.86
VPS55P47111 UPC2YDR213W 2742 nt3.46□□□□□ -1.86
VPS55P47111 SKG1YKR100C 1068 nt3.46□□□□□ -1.86
VPS55P47111 TDA5YLR426W 981 nt3.46□□□□□ -1.86
VPS55P47111 TPO2YGR138C 1845 nt3.46□□□□□ -1.86
VPS55P47111 MKS1YNL076W 1755 nt3.46□□□□□ -1.86
VPS55P47111 ISR1YPR106W 1332 nt3.45□□□□□ -1.86
VPS55P47111 TRS85YDR108W 2097 nt3.45□□□□□ -1.86
VPS55P47111 YMR221CYMR221C 1515 nt3.45□□□□□ -1.86
VPS55P47111 NUP42YDR192C 1293 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)CtK(CUU)C 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)D1tK(CUU)D1 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)D2tK(CUU)D2 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)E1tK(CUU)E1 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)E2tK(CUU)E2 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)FtK(CUU)F 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)G1tK(CUU)G1 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)G2tK(CUU)G2 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)G3tK(CUU)G3 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)ItK(CUU)I 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)JtK(CUU)J 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)KtK(CUU)K 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)MtK(CUU)M 73 nt3.45□□□□□ -1.86
VPS55P47111 tK(CUU)PtK(CUU)P 73 nt3.45□□□□□ -1.86
VPS55P47111 GPP1YIL053W 753 nt3.45□□□□□ -1.86
VPS55P47111 ARC40YBR234C 1155 nt3.45□□□□□ -1.86
VPS55P47111 SWC3YAL011W 1878 nt3.45□□□□□ -1.86
VPS55P47111 MET12YPL023C 1974 nt3.45□□□□□ -1.86
VPS55P47111 TOG1YER184C 2385 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms