Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
PDE6BP35913 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
PDE6BP35913 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
PDE6BP35913 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PDE6BP35913 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.34■■■□□ 2.13
PDE6BP35913 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.34■■■□□ 2.13
PDE6BP35913 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.34■■■□□ 2.13
PDE6BP35913 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.34■■■□□ 2.13
PDE6BP35913 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.34■■■□□ 2.13
PDE6BP35913 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
PDE6BP35913 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.34■■■□□ 2.13
PDE6BP35913 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDE6BP35913 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.33■■■□□ 2.13
PDE6BP35913 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
PDE6BP35913 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDE6BP35913 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDE6BP35913 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.33■■■□□ 2.13
PDE6BP35913 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDE6BP35913 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDE6BP35913 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDE6BP35913 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.32■■■□□ 2.12
PDE6BP35913 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PDE6BP35913 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDE6BP35913 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PDE6BP35913 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PDE6BP35913 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.32■■■□□ 2.12
PDE6BP35913 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.32■■■□□ 2.12
PDE6BP35913 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.32■■■□□ 2.12
PDE6BP35913 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PDE6BP35913 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.32■■■□□ 2.12
PDE6BP35913 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDE6BP35913 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDE6BP35913 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
PDE6BP35913 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PDE6BP35913 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PDE6BP35913 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
PDE6BP35913 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PDE6BP35913 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDE6BP35913 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDE6BP35913 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDE6BP35913 AC004911.1-201ENST00000416316 871 ntBASIC28.3■■■□□ 2.12
PDE6BP35913 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDE6BP35913 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.3■■■□□ 2.12
PDE6BP35913 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.3■■■□□ 2.12
PDE6BP35913 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PDE6BP35913 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE6BP35913 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
PDE6BP35913 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE6BP35913 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE6BP35913 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE6BP35913 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
PDE6BP35913 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE6BP35913 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.28■■■□□ 2.12
PDE6BP35913 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE6BP35913 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.28■■■□□ 2.12
PDE6BP35913 MIR572-201ENST00000384983 95 ntBASIC28.28■■■□□ 2.12
PDE6BP35913 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.28■■■□□ 2.12
PDE6BP35913 IGHV3-19-201ENST00000521488 291 ntBASIC28.28■■■□□ 2.12
PDE6BP35913 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.28■■■□□ 2.12
PDE6BP35913 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.28■■■□□ 2.12
PDE6BP35913 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.28■■■□□ 2.12
PDE6BP35913 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.27■■■□□ 2.12
PDE6BP35913 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE6BP35913 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE6BP35913 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PDE6BP35913 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE6BP35913 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PDE6BP35913 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PDE6BP35913 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.27■■■□□ 2.12
PDE6BP35913 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.27■■■□□ 2.12
PDE6BP35913 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.27■■■□□ 2.12
PDE6BP35913 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PDE6BP35913 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
PDE6BP35913 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.26■■■□□ 2.11
PDE6BP35913 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.26■■■□□ 2.11
PDE6BP35913 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PDE6BP35913 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.26■■■□□ 2.11
PDE6BP35913 ID1-201ENST00000376105 1233 ntBASIC28.26■■■□□ 2.11
PDE6BP35913 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.26■■■□□ 2.11
PDE6BP35913 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.26■■■□□ 2.11
PDE6BP35913 AL354811.1-201ENST00000610286 706 ntBASIC28.26■■■□□ 2.11
PDE6BP35913 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.26■■■□□ 2.11
PDE6BP35913 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDE6BP35913 AL161729.1-201ENST00000604104 1402 ntBASIC28.26■■■□□ 2.11
PDE6BP35913 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.26■■■□□ 2.11
PDE6BP35913 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE6BP35913 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PDE6BP35913 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.25■■■□□ 2.11
PDE6BP35913 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PDE6BP35913 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.25■■■□□ 2.11
PDE6BP35913 AC012414.1-201ENST00000556676 535 ntBASIC28.25■■■□□ 2.11
PDE6BP35913 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PDE6BP35913 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PDE6BP35913 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PDE6BP35913 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
PDE6BP35913 AC141586.4-201ENST00000624558 1573 ntBASIC28.24■■■□□ 2.11
PDE6BP35913 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PDE6BP35913 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDE6BP35913 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
PDE6BP35913 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms