Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1AP19438 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF1AP19438 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 AC131281.2-201ENST00000520478 145 ntBASIC19.18■□□□□ 0.66
TNFRSF1AP19438 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFRSF1AP19438 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF1AP19438 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 AC004812.2-201ENST00000611079 2094 ntBASIC19.16■□□□□ 0.66
TNFRSF1AP19438 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF1AP19438 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 AL136116.3-201ENST00000402907 1138 ntBASIC19.15■□□□□ 0.66
TNFRSF1AP19438 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 SRD5A1P1-201ENST00000442297 786 ntBASIC19.15■□□□□ 0.66
TNFRSF1AP19438 AL512631.2-201ENST00000604634 923 ntBASIC19.15■□□□□ 0.66
TNFRSF1AP19438 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TNFRSF1AP19438 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TNFRSF1AP19438 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFRSF1AP19438 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFRSF1AP19438 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TNFRSF1AP19438 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF1AP19438 AC009102.2-201ENST00000606772 1639 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms