Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MIR6084-201ENST00000622012 110 ntBASIC28.29■■■□□ 2.12
COL11A2P13942 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL11A2P13942 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL11A2P13942 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL11A2P13942 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
COL11A2P13942 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL11A2P13942 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.29■■■□□ 2.12
COL11A2P13942 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.29■■■□□ 2.12
COL11A2P13942 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
COL11A2P13942 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL11A2P13942 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL11A2P13942 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
COL11A2P13942 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.28■■■□□ 2.12
COL11A2P13942 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL11A2P13942 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
COL11A2P13942 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL11A2P13942 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL11A2P13942 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL11A2P13942 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL11A2P13942 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
COL11A2P13942 AC004911.1-201ENST00000416316 871 ntBASIC28.26■■■□□ 2.12
COL11A2P13942 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC28.26■■■□□ 2.12
COL11A2P13942 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.11
COL11A2P13942 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
COL11A2P13942 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL11A2P13942 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL11A2P13942 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.11
COL11A2P13942 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL11A2P13942 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.26■■■□□ 2.11
COL11A2P13942 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.26■■■□□ 2.11
COL11A2P13942 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.26■■■□□ 2.11
COL11A2P13942 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL11A2P13942 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.25■■■□□ 2.11
COL11A2P13942 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL11A2P13942 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.25■■■□□ 2.11
COL11A2P13942 CCDC92B-201ENST00000575506 885 ntBASIC28.25■■■□□ 2.11
COL11A2P13942 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.25■■■□□ 2.11
COL11A2P13942 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
COL11A2P13942 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.25■■■□□ 2.11
COL11A2P13942 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
COL11A2P13942 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL11A2P13942 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.24■■■□□ 2.11
COL11A2P13942 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL11A2P13942 ID1-201ENST00000376105 1233 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 AC123595.1-201ENST00000440769 1046 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 pRNA.6-201ENST00000610482 90 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 pRNA.5-201ENST00000612139 90 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 pRNA.11-201ENST00000618423 90 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 pRNA.13-201ENST00000619112 90 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL11A2P13942 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
COL11A2P13942 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL11A2P13942 KRT18P14-201ENST00000534205 1250 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.23■■■□□ 2.11
COL11A2P13942 AL358852.1-201ENST00000623174 1268 ntBASIC28.23■■■□□ 2.11
COL11A2P13942 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
COL11A2P13942 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL11A2P13942 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
COL11A2P13942 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.22■■■□□ 2.11
COL11A2P13942 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL11A2P13942 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL11A2P13942 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL11A2P13942 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL11A2P13942 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL11A2P13942 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL11A2P13942 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL11A2P13942 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
COL11A2P13942 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.21■■■□□ 2.11
COL11A2P13942 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL11A2P13942 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.21■■■□□ 2.11
COL11A2P13942 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.21■■■□□ 2.11
COL11A2P13942 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.21■■■□□ 2.11
COL11A2P13942 MIR572-201ENST00000384983 95 ntBASIC28.2■■■□□ 2.1
COL11A2P13942 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
COL11A2P13942 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL11A2P13942 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.19■■■□□ 2.1
COL11A2P13942 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL11A2P13942 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
COL11A2P13942 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
COL11A2P13942 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.19■■■□□ 2.1
COL11A2P13942 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL11A2P13942 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL11A2P13942 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL11A2P13942 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
COL11A2P13942 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
COL11A2P13942 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL11A2P13942 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL11A2P13942 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL11A2P13942 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL11A2P13942 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
COL11A2P13942 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL11A2P13942 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL11A2P13942 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL11A2P13942 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.17■■■□□ 2.1
COL11A2P13942 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
COL11A2P13942 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.17■■■□□ 2.1
COL11A2P13942 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
COL11A2P13942 TERF1P2-201ENST00000583350 1212 ntBASIC28.17■■■□□ 2.1
COL11A2P13942 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL11A2P13942 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms