Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL5A2P05997 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL5A2P05997 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
COL5A2P05997 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.43■■■□□ 2.46
COL5A2P05997 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.43■■■□□ 2.46
COL5A2P05997 AC012414.1-201ENST00000556676 535 ntBASIC30.43■■■□□ 2.46
COL5A2P05997 pRNA.6-201ENST00000610482 90 ntBASIC30.43■■■□□ 2.46
COL5A2P05997 pRNA.5-201ENST00000612139 90 ntBASIC30.43■■■□□ 2.46
COL5A2P05997 pRNA.11-201ENST00000618423 90 ntBASIC30.43■■■□□ 2.46
COL5A2P05997 pRNA.13-201ENST00000619112 90 ntBASIC30.43■■■□□ 2.46
COL5A2P05997 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
COL5A2P05997 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
COL5A2P05997 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.42■■■□□ 2.46
COL5A2P05997 AC092803.2-201ENST00000564287 1899 ntBASIC30.42■■■□□ 2.46
COL5A2P05997 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
COL5A2P05997 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL5A2P05997 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
COL5A2P05997 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
COL5A2P05997 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
COL5A2P05997 IGHV3-19-201ENST00000521488 291 ntBASIC30.42■■■□□ 2.46
COL5A2P05997 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.42■■■□□ 2.46
COL5A2P05997 AL358852.1-201ENST00000623174 1268 ntBASIC30.42■■■□□ 2.46
COL5A2P05997 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL5A2P05997 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL5A2P05997 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL5A2P05997 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL5A2P05997 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.41■■■□□ 2.46
COL5A2P05997 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.41■■■□□ 2.46
COL5A2P05997 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.41■■■□□ 2.46
COL5A2P05997 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
COL5A2P05997 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
COL5A2P05997 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.41■■■□□ 2.46
COL5A2P05997 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.4■■■□□ 2.46
COL5A2P05997 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.4■■■□□ 2.46
COL5A2P05997 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL5A2P05997 AC004911.1-201ENST00000416316 871 ntBASIC30.4■■■□□ 2.46
COL5A2P05997 MIR6084-201ENST00000622012 110 ntBASIC30.4■■■□□ 2.46
COL5A2P05997 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
COL5A2P05997 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
COL5A2P05997 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.39■■■□□ 2.46
COL5A2P05997 ID1-201ENST00000376105 1233 ntBASIC30.39■■■□□ 2.46
COL5A2P05997 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
COL5A2P05997 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL5A2P05997 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
COL5A2P05997 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL5A2P05997 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.38■■■□□ 2.45
COL5A2P05997 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.38■■■□□ 2.45
COL5A2P05997 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
COL5A2P05997 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL5A2P05997 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
COL5A2P05997 CCDC92B-201ENST00000575506 885 ntBASIC30.37■■■□□ 2.45
COL5A2P05997 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
COL5A2P05997 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL5A2P05997 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL5A2P05997 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL5A2P05997 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.35■■■□□ 2.45
COL5A2P05997 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
COL5A2P05997 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL5A2P05997 ME3-201ENST00000323418 1068 ntTSL 5 BASIC30.35■■■□□ 2.45
COL5A2P05997 MIR572-201ENST00000384983 95 ntBASIC30.35■■■□□ 2.45
COL5A2P05997 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.35■■■□□ 2.45
COL5A2P05997 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
COL5A2P05997 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
COL5A2P05997 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.35■■■□□ 2.45
COL5A2P05997 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
COL5A2P05997 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL5A2P05997 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL5A2P05997 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL5A2P05997 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.34■■■□□ 2.45
COL5A2P05997 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.34■■■□□ 2.45
COL5A2P05997 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC30.34■■■□□ 2.45
COL5A2P05997 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
COL5A2P05997 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
COL5A2P05997 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL5A2P05997 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL5A2P05997 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL5A2P05997 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.33■■■□□ 2.45
COL5A2P05997 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30.33■■■□□ 2.45
COL5A2P05997 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
COL5A2P05997 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL5A2P05997 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.33■■■□□ 2.45
COL5A2P05997 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
COL5A2P05997 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL5A2P05997 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL5A2P05997 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
COL5A2P05997 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
COL5A2P05997 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL5A2P05997 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
COL5A2P05997 AL354811.1-201ENST00000610286 706 ntBASIC30.31■■■□□ 2.44
COL5A2P05997 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC30.31■■■□□ 2.44
COL5A2P05997 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
COL5A2P05997 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
COL5A2P05997 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL5A2P05997 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
COL5A2P05997 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
COL5A2P05997 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL5A2P05997 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC30.31■■■□□ 2.44
COL5A2P05997 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
COL5A2P05997 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.3■■■□□ 2.44
COL5A2P05997 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms