Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC28A1O00337 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A1O00337 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A1O00337 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A1O00337 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC28A1O00337 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 MIR4281-201ENST00000580852 62 ntBASIC21.82■■□□□ 1.08
SLC28A1O00337 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 AF131216.4-201ENST00000638924 1588 ntBASIC21.82■■□□□ 1.08
SLC28A1O00337 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC28A1O00337 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A1O00337 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC28A1O00337 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SLC28A1O00337 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC28A1O00337 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC28A1O00337 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC28A1O00337 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC28A1O00337 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SLC28A1O00337 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC28A1O00337 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC28A1O00337 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A1O00337 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC28A1O00337 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC28A1O00337 AC010980.1-201ENST00000587192 1142 ntBASIC21.8■■□□□ 1.08
SLC28A1O00337 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A1O00337 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SLC28A1O00337 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SLC28A1O00337 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A1O00337 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC28A1O00337 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC28A1O00337 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC28A1O00337 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC28A1O00337 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC28A1O00337 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC28A1O00337 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC28A1O00337 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SLC28A1O00337 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC28A1O00337 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC28A1O00337 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC28A1O00337 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC28A1O00337 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A1O00337 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A1O00337 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A1O00337 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A1O00337 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC28A1O00337 AC004448.1-201ENST00000458332 883 ntBASIC21.77■■□□□ 1.08
SLC28A1O00337 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC28A1O00337 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC28A1O00337 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SLC28A1O00337 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A1O00337 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A1O00337 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A1O00337 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
SLC28A1O00337 AC079834.2-201ENST00000609776 1949 ntBASIC21.76■■□□□ 1.07
SLC28A1O00337 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC28A1O00337 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A1O00337 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC28A1O00337 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC28A1O00337 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC28A1O00337 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A1O00337 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A1O00337 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A1O00337 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC28A1O00337 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A1O00337 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC28A1O00337 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A1O00337 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SLC28A1O00337 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
SLC28A1O00337 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC28A1O00337 MIR4508-201ENST00000584178 70 ntBASIC21.74■■□□□ 1.07
SLC28A1O00337 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A1O00337 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A1O00337 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC28A1O00337 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC28A1O00337 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms