Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 KRT125P-201ENST00000546827 989 ntBASIC21.1■□□□□ 0.97
CLCA1A8K7I4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA1A8K7I4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 MIR4281-201ENST00000580852 62 ntBASIC21.09■□□□□ 0.97
CLCA1A8K7I4 AC011551.1-201ENST00000614101 683 ntBASIC21.09■□□□□ 0.97
CLCA1A8K7I4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLCA1A8K7I4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA1A8K7I4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA1A8K7I4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.08■□□□□ 0.97
CLCA1A8K7I4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CLCA1A8K7I4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCA1A8K7I4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCA1A8K7I4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 AC137630.3-201ENST00000607245 391 ntBASIC21.07■□□□□ 0.96
CLCA1A8K7I4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCA1A8K7I4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 HLA-L-211ENST00000482052 1765 ntBASIC21.06■□□□□ 0.96
CLCA1A8K7I4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.06■□□□□ 0.96
CLCA1A8K7I4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCA1A8K7I4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 MIR4787-201ENST00000607364 84 ntBASIC21.05■□□□□ 0.96
CLCA1A8K7I4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCA1A8K7I4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCA1A8K7I4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA1A8K7I4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA1A8K7I4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.03■□□□□ 0.96
CLCA1A8K7I4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCA1A8K7I4 AC233723.2-201ENST00000623798 2106 ntBASIC21.03■□□□□ 0.96
CLCA1A8K7I4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCA1A8K7I4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCA1A8K7I4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 AL356441.2-201ENST00000443009 864 ntBASIC21.02■□□□□ 0.96
CLCA1A8K7I4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCA1A8K7I4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA1A8K7I4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA1A8K7I4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA1A8K7I4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA1A8K7I4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA1A8K7I4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCA1A8K7I4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms