Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.19■■□□□ 1.3
SHISA7A6NL88 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SHISA7A6NL88 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.19■■□□□ 1.3
SHISA7A6NL88 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHISA7A6NL88 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SHISA7A6NL88 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.18■■□□□ 1.3
SHISA7A6NL88 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.18■■□□□ 1.3
SHISA7A6NL88 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHISA7A6NL88 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
SHISA7A6NL88 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHISA7A6NL88 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SHISA7A6NL88 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.18■■□□□ 1.3
SHISA7A6NL88 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SHISA7A6NL88 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHISA7A6NL88 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SHISA7A6NL88 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SHISA7A6NL88 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 pRNA.6-201ENST00000610482 90 ntBASIC23.17■■□□□ 1.3
SHISA7A6NL88 pRNA.5-201ENST00000612139 90 ntBASIC23.17■■□□□ 1.3
SHISA7A6NL88 pRNA.11-201ENST00000618423 90 ntBASIC23.17■■□□□ 1.3
SHISA7A6NL88 pRNA.13-201ENST00000619112 90 ntBASIC23.17■■□□□ 1.3
SHISA7A6NL88 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SHISA7A6NL88 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHISA7A6NL88 TSPY26P-201ENST00000476365 1326 ntBASIC23.16■■□□□ 1.3
SHISA7A6NL88 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.16■■□□□ 1.3
SHISA7A6NL88 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
SHISA7A6NL88 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHISA7A6NL88 SLC47A1P1-202ENST00000449666 945 ntBASIC23.16■■□□□ 1.3
SHISA7A6NL88 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.16■■□□□ 1.3
SHISA7A6NL88 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHISA7A6NL88 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.16■■□□□ 1.3
SHISA7A6NL88 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.16■■□□□ 1.3
SHISA7A6NL88 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SHISA7A6NL88 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SHISA7A6NL88 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.15■■□□□ 1.3
SHISA7A6NL88 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SHISA7A6NL88 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHISA7A6NL88 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHISA7A6NL88 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SHISA7A6NL88 AC126544.1-201ENST00000580842 1059 ntBASIC23.15■■□□□ 1.3
SHISA7A6NL88 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.15■■□□□ 1.3
SHISA7A6NL88 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.15■■□□□ 1.3
SHISA7A6NL88 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SHISA7A6NL88 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SHISA7A6NL88 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHISA7A6NL88 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SHISA7A6NL88 AC027612.3-201ENST00000413684 1047 ntBASIC23.14■■□□□ 1.29
SHISA7A6NL88 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SHISA7A6NL88 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SHISA7A6NL88 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.14■■□□□ 1.29
SHISA7A6NL88 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SHISA7A6NL88 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.13■■□□□ 1.29
SHISA7A6NL88 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHISA7A6NL88 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHISA7A6NL88 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SHISA7A6NL88 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.13■■□□□ 1.29
SHISA7A6NL88 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.13■■□□□ 1.29
SHISA7A6NL88 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHISA7A6NL88 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.12■■□□□ 1.29
SHISA7A6NL88 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.12■■□□□ 1.29
SHISA7A6NL88 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHISA7A6NL88 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
SHISA7A6NL88 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.12■■□□□ 1.29
SHISA7A6NL88 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHISA7A6NL88 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.12■■□□□ 1.29
SHISA7A6NL88 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHISA7A6NL88 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHISA7A6NL88 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHISA7A6NL88 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHISA7A6NL88 AC123595.1-201ENST00000440769 1046 ntBASIC23.11■■□□□ 1.29
SHISA7A6NL88 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SHISA7A6NL88 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHISA7A6NL88 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
SHISA7A6NL88 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHISA7A6NL88 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHISA7A6NL88 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHISA7A6NL88 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHISA7A6NL88 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.1■■□□□ 1.29
SHISA7A6NL88 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SHISA7A6NL88 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.1■■□□□ 1.29
SHISA7A6NL88 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SHISA7A6NL88 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.1■■□□□ 1.29
SHISA7A6NL88 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHISA7A6NL88 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SHISA7A6NL88 AL121749.1-202ENST00000609313 2153 ntBASIC23.1■■□□□ 1.29
SHISA7A6NL88 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHISA7A6NL88 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms