Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SSC5DA1L4H1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SSC5DA1L4H1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SSC5DA1L4H1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.89■■□□□ 1.9
SSC5DA1L4H1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SSC5DA1L4H1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SSC5DA1L4H1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
SSC5DA1L4H1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
SSC5DA1L4H1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.89■■□□□ 1.89
SSC5DA1L4H1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
SSC5DA1L4H1 pRNA.6-201ENST00000610482 90 ntBASIC26.88■■□□□ 1.89
SSC5DA1L4H1 pRNA.5-201ENST00000612139 90 ntBASIC26.88■■□□□ 1.89
SSC5DA1L4H1 pRNA.11-201ENST00000618423 90 ntBASIC26.88■■□□□ 1.89
SSC5DA1L4H1 pRNA.13-201ENST00000619112 90 ntBASIC26.88■■□□□ 1.89
SSC5DA1L4H1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SSC5DA1L4H1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SSC5DA1L4H1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SSC5DA1L4H1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
SSC5DA1L4H1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SSC5DA1L4H1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SSC5DA1L4H1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 AC126544.1-201ENST00000580842 1059 ntBASIC26.87■■□□□ 1.89
SSC5DA1L4H1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
SSC5DA1L4H1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SSC5DA1L4H1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SSC5DA1L4H1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SSC5DA1L4H1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SSC5DA1L4H1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
SSC5DA1L4H1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.85■■□□□ 1.89
SSC5DA1L4H1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SSC5DA1L4H1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 MIR6084-201ENST00000622012 110 ntBASIC26.84■■□□□ 1.89
SSC5DA1L4H1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SSC5DA1L4H1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SSC5DA1L4H1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SSC5DA1L4H1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SSC5DA1L4H1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.83■■□□□ 1.89
SSC5DA1L4H1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
SSC5DA1L4H1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.83■■□□□ 1.88
SSC5DA1L4H1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 IGHV3-19-201ENST00000521488 291 ntBASIC26.82■■□□□ 1.88
SSC5DA1L4H1 AC012414.1-201ENST00000556676 535 ntBASIC26.82■■□□□ 1.88
SSC5DA1L4H1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SSC5DA1L4H1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SSC5DA1L4H1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
SSC5DA1L4H1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
SSC5DA1L4H1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.81■■□□□ 1.88
SSC5DA1L4H1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
SSC5DA1L4H1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.8■■□□□ 1.88
SSC5DA1L4H1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SSC5DA1L4H1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.8■■□□□ 1.88
SSC5DA1L4H1 AC123595.1-201ENST00000440769 1046 ntBASIC26.8■■□□□ 1.88
SSC5DA1L4H1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SSC5DA1L4H1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SSC5DA1L4H1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SSC5DA1L4H1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.79■■□□□ 1.88
SSC5DA1L4H1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.79■■□□□ 1.88
SSC5DA1L4H1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SSC5DA1L4H1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SSC5DA1L4H1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
SSC5DA1L4H1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms