Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 AC009299.2-201ENST00000482477 511 ntBASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 Z92544.1-202ENST00000571933 1220 ntBASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV5S1A1TA0A578 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 MIR6722-201ENST00000617286 78 ntBASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.83■■□□□ 1.41
TCRBV5S1A1TA0A578 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.83■■□□□ 1.4
TCRBV5S1A1TA0A578 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TCRBV5S1A1TA0A578 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TCRBV5S1A1TA0A578 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 DUSP8P3-201ENST00000399571 1760 ntBASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV5S1A1TA0A578 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 AC092028.1-203ENST00000608262 953 ntBASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV5S1A1TA0A578 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 AC068473.5-201ENST00000616428 2072 ntBASIC23.79■■□□□ 1.4
TCRBV5S1A1TA0A578 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TCRBV5S1A1TA0A578 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
TCRBV5S1A1TA0A578 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV5S1A1TA0A578 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV5S1A1TA0A578 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.77■■□□□ 1.4
TCRBV5S1A1TA0A578 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV5S1A1TA0A578 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV5S1A1TA0A578 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TCRBV5S1A1TA0A578 AC239859.2-201ENST00000444165 318 ntBASIC23.76■■□□□ 1.39
TCRBV5S1A1TA0A578 MIR4787-201ENST00000607364 84 ntBASIC23.76■■□□□ 1.39
TCRBV5S1A1TA0A578 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
TCRBV5S1A1TA0A578 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV5S1A1TA0A578 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV5S1A1TA0A578 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms