Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.36□□□□□ -0.27
LRFN1Q9P244 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRFN1Q9P244 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRFN1Q9P244 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 FRMPD2B-201ENST00000431305 1347 ntBASIC13.36□□□□□ -0.27
LRFN1Q9P244 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.36□□□□□ -0.27
LRFN1Q9P244 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRFN1Q9P244 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRFN1Q9P244 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.36□□□□□ -0.27
LRFN1Q9P244 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 KRT18P36-201ENST00000411618 1276 ntBASIC13.35□□□□□ -0.27
LRFN1Q9P244 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 AC234782.1-201ENST00000451950 919 ntBASIC13.35□□□□□ -0.27
LRFN1Q9P244 AC116345.2-201ENST00000512837 523 ntBASIC13.35□□□□□ -0.27
LRFN1Q9P244 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRFN1Q9P244 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LRFN1Q9P244 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRFN1Q9P244 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 EEF1DP6-201ENST00000449232 372 ntBASIC13.34□□□□□ -0.27
LRFN1Q9P244 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.34□□□□□ -0.27
LRFN1Q9P244 PGAM1P5-201ENST00000548011 764 ntBASIC13.34□□□□□ -0.27
LRFN1Q9P244 AC242376.1-201ENST00000559033 726 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms