Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.36□□□□□ -0.27
CDC42P60953 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDC42P60953 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDC42P60953 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.35□□□□□ -0.27
CDC42P60953 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.35□□□□□ -0.27
CDC42P60953 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.35□□□□□ -0.27
CDC42P60953 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.35□□□□□ -0.27
CDC42P60953 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 GCOM2-201ENST00000509133 1104 ntBASIC13.35□□□□□ -0.27
CDC42P60953 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.35□□□□□ -0.27
CDC42P60953 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.35□□□□□ -0.27
CDC42P60953 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDC42P60953 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CDC42P60953 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.35□□□□□ -0.27
CDC42P60953 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDC42P60953 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 LRRC59-203ENST00000576448 1531 ntBASIC13.34□□□□□ -0.27
CDC42P60953 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.34□□□□□ -0.27
CDC42P60953 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC42P60953 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.34□□□□□ -0.27
CDC42P60953 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 AC083964.2-201ENST00000623988 2396 ntBASIC13.34□□□□□ -0.27
CDC42P60953 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 RNU1-114P-201ENST00000365297 166 ntBASIC13.34□□□□□ -0.27
CDC42P60953 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.34□□□□□ -0.27
CDC42P60953 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDC42P60953 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms