Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LSP1P33241 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LSP1P33241 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LSP1P33241 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LSP1P33241 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LSP1P33241 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LSP1P33241 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LSP1P33241 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.61□□□□□ -0.07
LSP1P33241 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.61□□□□□ -0.07
LSP1P33241 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.61□□□□□ -0.07
LSP1P33241 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LSP1P33241 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LSP1P33241 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.61□□□□□ -0.07
LSP1P33241 AC103988.2-201ENST00000561804 725 ntBASIC14.61□□□□□ -0.07
LSP1P33241 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LSP1P33241 AC055717.3-201ENST00000622967 595 ntBASIC14.61□□□□□ -0.07
LSP1P33241 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LSP1P33241 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LSP1P33241 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 MIR193BHG-211ENST00000641433 5365 ntBASIC14.61□□□□□ -0.07
LSP1P33241 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
LSP1P33241 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LSP1P33241 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LSP1P33241 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 FAM90A11P-201ENST00000518378 2218 ntBASIC14.6□□□□□ -0.07
LSP1P33241 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.6□□□□□ -0.07
LSP1P33241 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
LSP1P33241 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.6□□□□□ -0.07
LSP1P33241 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.6□□□□□ -0.07
LSP1P33241 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 DNAJB3-201ENST00000446806 729 ntBASIC14.6□□□□□ -0.07
LSP1P33241 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.6□□□□□ -0.07
LSP1P33241 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 AC131206.1-201ENST00000538078 1211 ntBASIC14.6□□□□□ -0.07
LSP1P33241 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.6□□□□□ -0.07
LSP1P33241 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LSP1P33241 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 AL079307.3-201ENST00000556114 283 ntBASIC14.6□□□□□ -0.07
LSP1P33241 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.6□□□□□ -0.07
LSP1P33241 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LSP1P33241 AC092865.6-201ENST00000642101 219 ntBASIC14.6□□□□□ -0.07
LSP1P33241 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 MSNP1-201ENST00000511640 1732 ntBASIC14.6□□□□□ -0.07
LSP1P33241 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.6□□□□□ -0.07
LSP1P33241 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LSP1P33241 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms