Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.86■□□□□ 0.13
RFX1P22670 RN7SL11P-201ENST00000471305 293 ntBASIC15.86■□□□□ 0.13
RFX1P22670 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 COX5BP1-201ENST00000507622 393 ntBASIC15.86■□□□□ 0.13
RFX1P22670 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.86■□□□□ 0.13
RFX1P22670 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.86■□□□□ 0.13
RFX1P22670 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.86■□□□□ 0.13
RFX1P22670 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.86■□□□□ 0.13
RFX1P22670 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RFX1P22670 MIR4722-201ENST00000578292 60 ntBASIC15.86■□□□□ 0.13
RFX1P22670 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 AC007663.3-201ENST00000609632 465 ntBASIC15.86■□□□□ 0.13
RFX1P22670 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 AC009093.2-202ENST00000620513 2079 ntBASIC15.86■□□□□ 0.13
RFX1P22670 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 AC011474.4-201ENST00000623523 2076 ntBASIC15.85■□□□□ 0.13
RFX1P22670 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 AL136309.1-201ENST00000403917 691 ntBASIC15.85■□□□□ 0.13
RFX1P22670 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.85■□□□□ 0.13
RFX1P22670 AL035414.1-201ENST00000451327 857 ntBASIC15.85■□□□□ 0.13
RFX1P22670 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 IMP3P2-201ENST00000489760 475 ntBASIC15.85■□□□□ 0.13
RFX1P22670 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 AC027237.1-201ENST00000560942 655 ntBASIC15.85■□□□□ 0.13
RFX1P22670 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.85■□□□□ 0.13
RFX1P22670 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFX1P22670 OR10B1P-201ENST00000601666 907 ntBASIC15.85■□□□□ 0.13
RFX1P22670 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.85■□□□□ 0.13
RFX1P22670 AP001505.2-201ENST00000616815 443 ntBASIC15.85■□□□□ 0.13
RFX1P22670 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.85■□□□□ 0.13
RFX1P22670 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 AC002472.3-201ENST00000640124 621 ntBASIC15.85■□□□□ 0.13
RFX1P22670 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFX1P22670 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFX1P22670 KRT8P28-201ENST00000433288 1390 ntBASIC15.85■□□□□ 0.13
RFX1P22670 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.85■□□□□ 0.13
RFX1P22670 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFX1P22670 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFX1P22670 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFX1P22670 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms