Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CD48P09326 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.04■□□□□ -0
CD48P09326 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD48P09326 ST20-AS1-201ENST00000560255 4223 ntBASIC15.04■□□□□ -0
CD48P09326 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.04■□□□□ -0
CD48P09326 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.04■□□□□ -0
CD48P09326 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.04■□□□□ -0
CD48P09326 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.04■□□□□ -0
CD48P09326 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.04■□□□□ -0
CD48P09326 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.04■□□□□ -0
CD48P09326 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 AL162426.1-201ENST00000624141 743 ntBASIC15.04■□□□□ -0
CD48P09326 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD48P09326 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.04■□□□□ -0
CD48P09326 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CD48P09326 AC097376.2-205ENST00000610159 5334 ntBASIC15.03■□□□□ -0
CD48P09326 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CD48P09326 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.03■□□□□ -0
CD48P09326 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.03■□□□□ -0
CD48P09326 REXO1L6P-201ENST00000603433 1515 ntBASIC15.03■□□□□ -0
CD48P09326 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CD48P09326 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.03■□□□□ -0
CD48P09326 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.03■□□□□ -0
CD48P09326 GPR53P-205ENST00000457298 1084 ntBASIC15.03■□□□□ -0
CD48P09326 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 TMEM198B-204ENST00000484016 896 ntBASIC15.03■□□□□ -0
CD48P09326 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.03■□□□□ -0
CD48P09326 DUX4L45-201ENST00000566406 1057 ntBASIC15.03■□□□□ -0
CD48P09326 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CD48P09326 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.03■□□□□ -0
CD48P09326 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 AC009542.2-202ENST00000619004 1067 ntBASIC15.03■□□□□ -0
CD48P09326 COX11-210ENST00000639671 696 ntBASIC15.03■□□□□ -0
CD48P09326 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CD48P09326 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.03■□□□□ -0
CD48P09326 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.03■□□□□ -0
CD48P09326 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.03■□□□□ -0
CD48P09326 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CD48P09326 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.03■□□□□ -0
CD48P09326 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.03■□□□□ -0
CD48P09326 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD48P09326 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CD48P09326 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CD48P09326 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CD48P09326 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CD48P09326 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CD48P09326 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.02■□□□□ -0
CD48P09326 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CD48P09326 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.02■□□□□ -0
CD48P09326 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.02■□□□□ -0
CD48P09326 AC079178.1-201ENST00000420915 656 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms