Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 CCT8L1P-201ENST00000465400 1674 ntBASIC13.68□□□□□ -0.22
CTSBP07858 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CTSBP07858 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CTSBP07858 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSBP07858 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSBP07858 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 AC007191.1-201ENST00000623179 2995 ntBASIC13.67□□□□□ -0.22
CTSBP07858 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 KRT17P5-201ENST00000332088 839 ntBASIC13.67□□□□□ -0.22
CTSBP07858 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSBP07858 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSBP07858 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSBP07858 RN7SL530P-201ENST00000485097 298 ntBASIC13.67□□□□□ -0.22
CTSBP07858 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
CTSBP07858 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSBP07858 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 AL591471.1-201ENST00000621855 229 ntBASIC13.67□□□□□ -0.22
CTSBP07858 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 AC067930.6-201ENST00000623257 4947 ntBASIC13.67□□□□□ -0.22
CTSBP07858 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSBP07858 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSBP07858 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSBP07858 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CTSBP07858 LINC02486-201ENST00000604157 3000 ntBASIC13.66□□□□□ -0.22
CTSBP07858 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSBP07858 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSBP07858 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSBP07858 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSBP07858 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSBP07858 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSBP07858 RPSAP15-201ENST00000448168 861 ntBASIC13.66□□□□□ -0.22
CTSBP07858 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSBP07858 RN7SL258P-201ENST00000478664 300 ntBASIC13.66□□□□□ -0.22
CTSBP07858 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSBP07858 AC008723.1-201ENST00000506922 207 ntBASIC13.66□□□□□ -0.22
CTSBP07858 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.66□□□□□ -0.22
CTSBP07858 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSBP07858 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSBP07858 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms