Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 TUBA3GP-201ENST00000410028 1325 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 SERPINB8P1-201ENST00000401898 377 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 RPSAP61-201ENST00000412542 878 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AP001331.1-201ENST00000413008 1015 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 TUBB8P9-201ENST00000422534 1276 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 TUBB8P10-201ENST00000430210 1279 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AC245369.8-201ENST00000636589 306 ntBASIC17.55■□□□□ 0.4
RGPD3A6NKT7 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 PAX6-247ENST00000638965 979 ntTSL 5 BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RGPD3A6NKT7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AACSP1-202ENST00000521412 1095 ntBASIC17.54■□□□□ 0.4
RGPD3A6NKT7 HNRNPA1P72-201ENST00000529511 967 ntBASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 RN7SL162P-201ENST00000579233 292 ntBASIC17.54■□□□□ 0.4
RGPD3A6NKT7 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RGPD3A6NKT7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 FTH1-205ENST00000529631 507 ntTSL 4 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 FOS-205ENST00000555242 629 ntTSL 2 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AL136298.3-201ENST00000556746 445 ntBASIC17.53■□□□□ 0.4
RGPD3A6NKT7 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AC015818.3-201ENST00000583797 589 ntBASIC17.53■□□□□ 0.4
RGPD3A6NKT7 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17.53■□□□□ 0.4
RGPD3A6NKT7 MKL1-204ENST00000402630 747 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms