Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC104989.1-201ENST00000519711 778 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC078819.1-201ENST00000547454 765 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC012085.1-201ENST00000548270 765 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC138466.3-201ENST00000619983 221 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 CLUHP2-201ENST00000426660 1303 ntBASIC13.83□□□□□ -0.2
COL21A1Q96P44 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
COL21A1Q96P44 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL21A1Q96P44 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 OR8S1-201ENST00000310194 1080 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC006001.1-201ENST00000325130 474 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 MIR1909-201ENST00000411312 80 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC079316.1-201ENST00000548397 411 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC017083.2-201ENST00000608069 979 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC006453.4-201ENST00000636949 1252 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AL122018.1-201ENST00000446607 2310 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 MYADML-201ENST00000474610 2147 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 DGCR9-201ENST00000609630 2415 ntBASIC13.82□□□□□ -0.2
COL21A1Q96P44 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL21A1Q96P44 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.82□□□□□ -0.2
COL21A1Q96P44 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms