Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC010328.2-201ENST00000597698 1111 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 CCNT2P1-201ENST00000423082 1315 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 FKBP4P6-201ENST00000457486 1332 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC015656.1-201ENST00000624209 3578 ntBASIC14.91□□□□□ -0.02
PTCD2Q8WV60 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AC139712.1-201ENST00000378256 1875 ntBASIC14.91□□□□□ -0.02
PTCD2Q8WV60 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 BLNK-209ENST00000495266 440 ntTSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AC079316.1-201ENST00000548397 411 ntBASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 OR6C71P-202ENST00000641886 1107 ntBASIC14.91□□□□□ -0.02
PTCD2Q8WV60 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.91□□□□□ -0.02
PTCD2Q8WV60 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 AC015688.4-201ENST00000580780 1647 ntBASIC14.91□□□□□ -0.02
PTCD2Q8WV60 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTCD2Q8WV60 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AL590440.2-201ENST00000641973 1595 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms