Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 SEPT4-204ENST00000412945 1597 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AF001548.3-201ENST00000624545 1743 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AL590483.3-201ENST00000623669 3580 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 DAB1-203ENST00000371231 1802 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AC133919.3-201ENST00000621407 1804 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 AC113367.3-201ENST00000508316 1912 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 GHET1-201ENST00000627071 1906 ntBASIC8.68□□□□□ -1.02
SVIPQ8NHG7 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 TMC8-202ENST00000589691 3927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 LINC01600-201ENST00000624527 2434 ntTSL 2 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 SORD2P-202ENST00000561384 2498 ntTSL 5 BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SVIPQ8NHG7 HDC-201ENST00000267845 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 GFM2-201ENST00000296805 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AC093390.1-201ENST00000426976 3403 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AL160006.1-201ENST00000554749 4216 ntBASIC8.67□□□□□ -1.02
SVIPQ8NHG7 ZFYVE1-208ENST00000556143 4485 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 ST7L-203ENST00000360743 4206 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AL356234.1-201ENST00000404534 1779 ntBASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 AC112504.1-201ENST00000623415 1841 ntBASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CASC19-229ENST00000641418 1373 ntBASIC8.67□□□□□ -1.02
SVIPQ8NHG7 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 MGAT5B-203ENST00000428789 4053 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms