Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CD47Q08722 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.58□□□□□ -0.23
CD47Q08722 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CD47Q08722 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CD47Q08722 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 INTS4P2-202ENST00000614726 2019 ntBASIC13.58□□□□□ -0.24
CD47Q08722 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CD47Q08722 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.58□□□□□ -0.24
CD47Q08722 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 UGT1A2P-201ENST00000454886 866 ntBASIC13.58□□□□□ -0.24
CD47Q08722 GAPDHP40-201ENST00000505218 1006 ntBASIC13.58□□□□□ -0.24
CD47Q08722 AC026410.3-201ENST00000514280 936 ntBASIC13.58□□□□□ -0.24
CD47Q08722 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.58□□□□□ -0.24
CD47Q08722 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.58□□□□□ -0.24
CD47Q08722 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.58□□□□□ -0.24
CD47Q08722 AC004233.3-201ENST00000607794 1269 ntBASIC13.58□□□□□ -0.24
CD47Q08722 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.58□□□□□ -0.24
CD47Q08722 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CD47Q08722 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CD47Q08722 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CD47Q08722 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 AL158070.2-201ENST00000623713 1621 ntBASIC13.57□□□□□ -0.24
CD47Q08722 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CD47Q08722 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CD47Q08722 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 AC134915.1-201ENST00000426461 574 ntBASIC13.57□□□□□ -0.24
CD47Q08722 AL353779.1-201ENST00000434793 351 ntBASIC13.57□□□□□ -0.24
CD47Q08722 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.57□□□□□ -0.24
CD47Q08722 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.57□□□□□ -0.24
CD47Q08722 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.57□□□□□ -0.24
CD47Q08722 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.57□□□□□ -0.24
CD47Q08722 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CD47Q08722 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 AC092364.2-202ENST00000597012 1073 ntBASIC13.57□□□□□ -0.24
CD47Q08722 AC093813.1-201ENST00000605066 256 ntBASIC13.57□□□□□ -0.24
CD47Q08722 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 AJ011932.1-201ENST00000621707 465 ntBASIC13.57□□□□□ -0.24
CD47Q08722 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms