Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC012044.1-201ENST00000603431 297 ntBASIC14.25□□□□□ -0.13
CDK3Q00526 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 MIR6769A-201ENST00000617340 73 ntBASIC14.25□□□□□ -0.13
CDK3Q00526 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 KRT8P19-201ENST00000551916 1455 ntBASIC14.25□□□□□ -0.13
CDK3Q00526 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.24□□□□□ -0.13
CDK3Q00526 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.24□□□□□ -0.13
CDK3Q00526 RN7SL258P-201ENST00000478664 300 ntBASIC14.24□□□□□ -0.13
CDK3Q00526 RN7SL277P-201ENST00000481521 288 ntBASIC14.24□□□□□ -0.13
CDK3Q00526 RN7SL530P-201ENST00000485097 298 ntBASIC14.24□□□□□ -0.13
CDK3Q00526 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.24□□□□□ -0.13
CDK3Q00526 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 AC068418.2-201ENST00000577309 3703 ntBASIC14.24□□□□□ -0.13
CDK3Q00526 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.24□□□□□ -0.13
CDK3Q00526 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDK3Q00526 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDK3Q00526 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.23□□□□□ -0.13
CDK3Q00526 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDK3Q00526 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CDK3Q00526 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms