Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
AP1S2P56377 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
AP1S2P56377 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.18□□□□□ -0.14
AP1S2P56377 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 RBM8B-201ENST00000555532 525 ntBASIC14.18□□□□□ -0.14
AP1S2P56377 AC100827.2-201ENST00000563214 1194 ntBASIC14.18□□□□□ -0.14
AP1S2P56377 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.18□□□□□ -0.14
AP1S2P56377 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
AP1S2P56377 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
AP1S2P56377 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP1S2P56377 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.18□□□□□ -0.14
AP1S2P56377 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.17□□□□□ -0.14
AP1S2P56377 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP1S2P56377 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
AP1S2P56377 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 AC015818.8-201ENST00000587907 1519 ntBASIC14.17□□□□□ -0.14
AP1S2P56377 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.17□□□□□ -0.14
AP1S2P56377 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.17□□□□□ -0.14
AP1S2P56377 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.17□□□□□ -0.14
AP1S2P56377 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.17□□□□□ -0.14
AP1S2P56377 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 AC119751.2-201ENST00000504529 210 ntBASIC14.17□□□□□ -0.14
AP1S2P56377 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 RNA5SP412-201ENST00000516234 123 ntBASIC14.17□□□□□ -0.14
AP1S2P56377 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.17□□□□□ -0.14
AP1S2P56377 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 MIR4741-201ENST00000579822 90 ntBASIC14.17□□□□□ -0.14
AP1S2P56377 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.17□□□□□ -0.14
AP1S2P56377 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 AL162426.1-201ENST00000624141 743 ntBASIC14.17□□□□□ -0.14
AP1S2P56377 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.17□□□□□ -0.14
AP1S2P56377 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S2P56377 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP1S2P56377 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
AP1S2P56377 KRT8P24-201ENST00000560290 1559 ntBASIC14.17□□□□□ -0.14
AP1S2P56377 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP1S2P56377 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 AL008718.2-201ENST00000609206 1313 ntBASIC14.16□□□□□ -0.14
AP1S2P56377 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 REXO1L6P-201ENST00000603433 1515 ntBASIC14.16□□□□□ -0.14
AP1S2P56377 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms