Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
FOXN3O00409 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 HLA-V-201ENST00000429037 534 ntBASIC15.57■□□□□ 0.08
FOXN3O00409 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXN3O00409 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXN3O00409 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXN3O00409 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXN3O00409 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FOXN3O00409 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXN3O00409 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXN3O00409 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXN3O00409 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.56■□□□□ 0.08
FOXN3O00409 AC119751.2-201ENST00000504529 210 ntBASIC15.56■□□□□ 0.08
FOXN3O00409 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.56■□□□□ 0.08
FOXN3O00409 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXN3O00409 MIR4741-201ENST00000579822 90 ntBASIC15.56■□□□□ 0.08
FOXN3O00409 AC063926.2-201ENST00000623766 1308 ntBASIC15.56■□□□□ 0.08
FOXN3O00409 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXN3O00409 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXN3O00409 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 AC111170.3-201ENST00000624282 2464 ntBASIC15.56■□□□□ 0.08
FOXN3O00409 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXN3O00409 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXN3O00409 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXN3O00409 LINC02486-201ENST00000604157 3000 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXN3O00409 AC130686.1-201ENST00000622936 2466 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 REXO1L6P-201ENST00000603433 1515 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms