Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP6V0A4Q9HBG4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 AL390755.1-201ENST00000623716 2027 ntBASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATP6V0A4Q9HBG4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 AC024681.1-201ENST00000521917 487 ntBASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 AC008132.1-202ENST00000342005 1389 ntBASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 CYP4F23P-201ENST00000593402 1579 ntBASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP6V0A4Q9HBG4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 AC005912.2-201ENST00000619492 2400 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 ACTG1P2-201ENST00000415776 1125 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 ACTG1P11-201ENST00000425411 1125 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 AC009779.1-201ENST00000551138 283 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 FGFR3P5-201ENST00000564496 886 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 AL132994.2-201ENST00000603120 687 ntBASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP6V0A4Q9HBG4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms