Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AC134698.3-201ENST00000523880 214 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AC090857.1-201ENST00000527400 390 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 MIR3907-201ENST00000579424 151 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AC244452.3-201ENST00000636814 210 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AL009178.2-201ENST00000597278 2719 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 IMP3P2-201ENST00000489760 475 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 ALG1L13P-202ENST00000519320 584 ntBASIC14.51□□□□□ -0.09
CHD5Q8TDI0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD5Q8TDI0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 TBC1D3J-201ENST00000620719 1426 ntBASIC14.5□□□□□ -0.09
CHD5Q8TDI0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 MARK2P16-201ENST00000605714 1723 ntBASIC14.5□□□□□ -0.09
CHD5Q8TDI0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 AL133467.4-201ENST00000602953 725 ntBASIC14.5□□□□□ -0.09
CHD5Q8TDI0 AL161773.1-201ENST00000624845 863 ntBASIC14.5□□□□□ -0.09
CHD5Q8TDI0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD5Q8TDI0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms