Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC010536.1-201ENST00000538868 2611 ntBASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AC026992.2-203ENST00000563004 2419 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 GHSR-202ENST00000427970 912 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AL442647.2-201ENST00000429864 857 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 BRI3BPP1-201ENST00000594224 787 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 TMEM261P1-201ENST00000604899 340 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AC093813.1-201ENST00000605066 256 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 INTS4P2-202ENST00000614726 2019 ntBASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM53Q6P2H8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM53Q6P2H8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms