Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 SUPT4H1P2-201ENST00000501248 353 ntBASIC13□□□□□ -0.33
GFRA1P56159 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 AC140658.4-201ENST00000561990 352 ntBASIC13□□□□□ -0.33
GFRA1P56159 MIR4754-201ENST00000582477 89 ntBASIC13□□□□□ -0.33
GFRA1P56159 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13□□□□□ -0.33
GFRA1P56159 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13□□□□□ -0.33
GFRA1P56159 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13□□□□□ -0.33
GFRA1P56159 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GFRA1P56159 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
GFRA1P56159 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GFRA1P56159 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GFRA1P56159 RNA5SP359-201ENST00000364838 113 ntBASIC12.99□□□□□ -0.33
GFRA1P56159 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.99□□□□□ -0.33
GFRA1P56159 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.99□□□□□ -0.33
GFRA1P56159 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.99□□□□□ -0.33
GFRA1P56159 IMP3P2-201ENST00000489760 475 ntBASIC12.99□□□□□ -0.33
GFRA1P56159 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 AC242376.1-201ENST00000559033 726 ntBASIC12.99□□□□□ -0.33
GFRA1P56159 AC105129.2-201ENST00000559536 390 ntBASIC12.99□□□□□ -0.33
GFRA1P56159 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.99□□□□□ -0.33
GFRA1P56159 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 AL022334.2-201ENST00000610000 484 ntBASIC12.99□□□□□ -0.33
GFRA1P56159 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GFRA1P56159 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.99□□□□□ -0.33
GFRA1P56159 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GFRA1P56159 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GFRA1P56159 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.98□□□□□ -0.33
GFRA1P56159 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
GFRA1P56159 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.98□□□□□ -0.33
GFRA1P56159 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.98□□□□□ -0.33
GFRA1P56159 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GFRA1P56159 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.98□□□□□ -0.33
GFRA1P56159 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GFRA1P56159 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GFRA1P56159 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms