Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC009779.1-201ENST00000551138 283 ntBASIC14.46□□□□□ -0.09
HMGCLP35914 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGCLP35914 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCLP35914 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGCLP35914 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HMGCLP35914 AL591471.1-201ENST00000621855 229 ntBASIC14.46□□□□□ -0.09
HMGCLP35914 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGCLP35914 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.46□□□□□ -0.09
HMGCLP35914 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGCLP35914 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGCLP35914 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGCLP35914 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
HMGCLP35914 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCLP35914 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
HMGCLP35914 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.46□□□□□ -0.1
HMGCLP35914 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.46□□□□□ -0.1
HMGCLP35914 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCLP35914 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCLP35914 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGCLP35914 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 TUBB8P4-201ENST00000511806 1324 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 CICP16-201ENST00000502609 2813 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGCLP35914 NKAIN1P1-201ENST00000435754 582 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 OR2R1P-201ENST00000441404 914 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 AC044849.1-201ENST00000519737 1188 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGCLP35914 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGCLP35914 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 MIR4538-201ENST00000581377 78 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGCLP35914 AC018629.1-201ENST00000623381 1736 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
HMGCLP35914 AC117489.1-201ENST00000625169 3217 ntBASIC14.45□□□□□ -0.1
HMGCLP35914 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGCLP35914 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGCLP35914 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCLP35914 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGCLP35914 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
HMGCLP35914 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGCLP35914 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HMGCLP35914 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMGCLP35914 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
HMGCLP35914 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGCLP35914 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGCLP35914 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms