Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RETP07949 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.69□□□□□ -0.06
RETP07949 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.69□□□□□ -0.06
RETP07949 AC092638.2-201ENST00000441105 947 ntBASIC14.69□□□□□ -0.06
RETP07949 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.69□□□□□ -0.06
RETP07949 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.69□□□□□ -0.06
RETP07949 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.69□□□□□ -0.06
RETP07949 AP003392.6-201ENST00000607709 325 ntBASIC14.69□□□□□ -0.06
RETP07949 MIR6720-201ENST00000611664 98 ntBASIC14.69□□□□□ -0.06
RETP07949 AC073911.3-201ENST00000624401 631 ntBASIC14.69□□□□□ -0.06
RETP07949 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RETP07949 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RETP07949 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RETP07949 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RETP07949 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.69□□□□□ -0.06
RETP07949 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.69□□□□□ -0.06
RETP07949 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.69□□□□□ -0.06
RETP07949 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.69□□□□□ -0.06
RETP07949 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.69□□□□□ -0.06
RETP07949 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RETP07949 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 INE2-201ENST00000630399 1874 ntBASIC14.68□□□□□ -0.06
RETP07949 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 ACE3P-201ENST00000423435 1973 ntBASIC14.68□□□□□ -0.06
RETP07949 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.68□□□□□ -0.06
RETP07949 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RETP07949 MIR557-201ENST00000385239 98 ntBASIC14.68□□□□□ -0.06
RETP07949 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.68□□□□□ -0.06
RETP07949 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.68□□□□□ -0.06
RETP07949 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RETP07949 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RETP07949 MIR4522-201ENST00000584932 87 ntBASIC14.68□□□□□ -0.06
RETP07949 AC107464.3-201ENST00000609172 737 ntBASIC14.68□□□□□ -0.06
RETP07949 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RETP07949 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RETP07949 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.68□□□□□ -0.06
RETP07949 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.68□□□□□ -0.06
RETP07949 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RETP07949 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RETP07949 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RETP07949 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RETP07949 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.67□□□□□ -0.06
RETP07949 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RETP07949 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.67□□□□□ -0.06
RETP07949 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RETP07949 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms